feat(alembic): add initial schema migration for all SQLAlchemy models
Initializes Alembic with autogenerated migration covering all 11 tables (tasks, users, projects, project_files, ontologies, graphs, simulations, reports, system_config, invitation_tokens, password_reset_tokens). Adds *.db to .gitignore to exclude local SQLite dev database. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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@ -58,6 +58,9 @@ backend/uploads/
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# Docker 数据
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data/
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# SQLite local dev database
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*.db
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# Git worktrees
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.worktrees/
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# A generic, single database configuration.
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[alembic]
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# path to migration scripts.
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# this is typically a path given in POSIX (e.g. forward slashes)
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# format, relative to the token %(here)s which refers to the location of this
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# ini file
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script_location = %(here)s/alembic
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# template used to generate migration file names; The default value is %%(rev)s_%%(slug)s
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# Uncomment the line below if you want the files to be prepended with date and time
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# see https://alembic.sqlalchemy.org/en/latest/tutorial.html#editing-the-ini-file
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# for all available tokens
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# file_template = %%(year)d_%%(month).2d_%%(day).2d_%%(hour).2d%%(minute).2d-%%(rev)s_%%(slug)s
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# Or organize into date-based subdirectories (requires recursive_version_locations = true)
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# file_template = %%(year)d/%%(month).2d/%%(day).2d_%%(hour).2d%%(minute).2d_%%(second).2d_%%(rev)s_%%(slug)s
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# sys.path path, will be prepended to sys.path if present.
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# defaults to the current working directory. for multiple paths, the path separator
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# is defined by "path_separator" below.
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prepend_sys_path = .
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# timezone to use when rendering the date within the migration file
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# as well as the filename.
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# If specified, requires the tzdata library which can be installed by adding
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# `alembic[tz]` to the pip requirements.
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# string value is passed to ZoneInfo()
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# leave blank for localtime
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# timezone =
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# max length of characters to apply to the "slug" field
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# truncate_slug_length = 40
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# set to 'true' to run the environment during
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# the 'revision' command, regardless of autogenerate
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# revision_environment = false
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# set to 'true' to allow .pyc and .pyo files without
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# a source .py file to be detected as revisions in the
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# versions/ directory
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# sourceless = false
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# version location specification; This defaults
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# to <script_location>/versions. When using multiple version
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# directories, initial revisions must be specified with --version-path.
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# The path separator used here should be the separator specified by "path_separator"
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# below.
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# version_locations = %(here)s/bar:%(here)s/bat:%(here)s/alembic/versions
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# path_separator; This indicates what character is used to split lists of file
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# paths, including version_locations and prepend_sys_path within configparser
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# files such as alembic.ini.
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# The default rendered in new alembic.ini files is "os", which uses os.pathsep
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# to provide os-dependent path splitting.
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#
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# Note that in order to support legacy alembic.ini files, this default does NOT
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# take place if path_separator is not present in alembic.ini. If this
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# option is omitted entirely, fallback logic is as follows:
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#
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# 1. Parsing of the version_locations option falls back to using the legacy
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# "version_path_separator" key, which if absent then falls back to the legacy
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# behavior of splitting on spaces and/or commas.
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# 2. Parsing of the prepend_sys_path option falls back to the legacy
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# behavior of splitting on spaces, commas, or colons.
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#
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# Valid values for path_separator are:
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#
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# path_separator = :
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# path_separator = ;
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# path_separator = space
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# path_separator = newline
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#
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# Use os.pathsep. Default configuration used for new projects.
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path_separator = os
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# set to 'true' to search source files recursively
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# in each "version_locations" directory
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# new in Alembic version 1.10
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# recursive_version_locations = false
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# the output encoding used when revision files
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# are written from script.py.mako
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# output_encoding = utf-8
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# database URL. This is consumed by the user-maintained env.py script only.
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# other means of configuring database URLs may be customized within the env.py
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# file.
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sqlalchemy.url = sqlite:///mirofish_dev.db
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[post_write_hooks]
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# post_write_hooks defines scripts or Python functions that are run
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# on newly generated revision scripts. See the documentation for further
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# detail and examples
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# format using "black" - use the console_scripts runner, against the "black" entrypoint
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# hooks = black
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# black.type = console_scripts
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# black.entrypoint = black
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# black.options = -l 79 REVISION_SCRIPT_FILENAME
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# lint with attempts to fix using "ruff" - use the module runner, against the "ruff" module
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# hooks = ruff
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# ruff.type = module
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# ruff.module = ruff
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# ruff.options = check --fix REVISION_SCRIPT_FILENAME
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# Alternatively, use the exec runner to execute a binary found on your PATH
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# hooks = ruff
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# ruff.type = exec
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# ruff.executable = ruff
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# ruff.options = check --fix REVISION_SCRIPT_FILENAME
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# Logging configuration. This is also consumed by the user-maintained
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# env.py script only.
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[loggers]
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keys = root,sqlalchemy,alembic
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[handlers]
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keys = console
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[formatters]
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keys = generic
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[logger_root]
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level = WARNING
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handlers = console
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qualname =
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[logger_sqlalchemy]
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level = WARNING
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handlers =
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qualname = sqlalchemy.engine
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[logger_alembic]
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level = INFO
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handlers =
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qualname = alembic
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[handler_console]
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class = StreamHandler
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args = (sys.stderr,)
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level = NOTSET
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formatter = generic
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[formatter_generic]
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format = %(levelname)-5.5s [%(name)s] %(message)s
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datefmt = %H:%M:%S
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Generic single-database configuration.
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# backend/alembic/env.py
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import os
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import sys
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from logging.config import fileConfig
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from sqlalchemy import engine_from_config, pool
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from alembic import context
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# Afegir el backend al path perquè els imports funcionin
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sys.path.insert(0, os.path.join(os.path.dirname(__file__), '..'))
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from app.db import Base
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import app.models.db_models # noqa: F401 — registra tots els models al Base
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config = context.config
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# Llegir DATABASE_URL de l'entorn (prioritat sobre alembic.ini)
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db_url = os.environ.get('DATABASE_URL', config.get_main_option('sqlalchemy.url'))
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config.set_main_option('sqlalchemy.url', db_url)
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if config.config_file_name is not None:
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fileConfig(config.config_file_name)
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target_metadata = Base.metadata
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def run_migrations_offline():
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url = config.get_main_option("sqlalchemy.url")
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context.configure(url=url, target_metadata=target_metadata, literal_binds=True)
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with context.begin_transaction():
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context.run_migrations()
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def run_migrations_online():
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connectable = engine_from_config(
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config.get_section(config.config_ini_section, {}),
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prefix="sqlalchemy.",
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poolclass=pool.NullPool,
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)
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with connectable.connect() as connection:
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context.configure(connection=connection, target_metadata=target_metadata)
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with context.begin_transaction():
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context.run_migrations()
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if context.is_offline_mode():
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run_migrations_offline()
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else:
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run_migrations_online()
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"""${message}
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Revision ID: ${up_revision}
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Revises: ${down_revision | comma,n}
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Create Date: ${create_date}
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"""
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from typing import Sequence, Union
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from alembic import op
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import sqlalchemy as sa
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${imports if imports else ""}
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# revision identifiers, used by Alembic.
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revision: str = ${repr(up_revision)}
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down_revision: Union[str, Sequence[str], None] = ${repr(down_revision)}
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branch_labels: Union[str, Sequence[str], None] = ${repr(branch_labels)}
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depends_on: Union[str, Sequence[str], None] = ${repr(depends_on)}
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def upgrade() -> None:
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"""Upgrade schema."""
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${upgrades if upgrades else "pass"}
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def downgrade() -> None:
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"""Downgrade schema."""
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${downgrades if downgrades else "pass"}
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@ -0,0 +1,183 @@
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"""initial_schema
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Revision ID: fef526537305
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Revises:
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Create Date: 2026-05-03 00:03:51.173534
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"""
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from typing import Sequence, Union
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from alembic import op
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import sqlalchemy as sa
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# revision identifiers, used by Alembic.
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revision: str = 'fef526537305'
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down_revision: Union[str, Sequence[str], None] = None
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branch_labels: Union[str, Sequence[str], None] = None
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depends_on: Union[str, Sequence[str], None] = None
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def upgrade() -> None:
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"""Upgrade schema."""
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# ### commands auto generated by Alembic - please adjust! ###
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op.create_table('tasks',
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sa.Column('id', sa.String(length=36), nullable=False),
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sa.Column('task_type', sa.String(length=100), nullable=False),
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sa.Column('entity_type', sa.String(length=50), nullable=True),
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sa.Column('entity_id', sa.String(length=36), nullable=True),
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sa.Column('status', sa.String(length=20), nullable=False),
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sa.Column('progress', sa.Integer(), nullable=False),
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sa.Column('message', sa.Text(), nullable=True),
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sa.Column('result', sa.JSON(), nullable=True),
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sa.Column('error', sa.Text(), nullable=True),
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sa.Column('progress_detail', sa.JSON(), nullable=True),
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sa.Column('created_at', sa.DateTime(), nullable=False),
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sa.Column('updated_at', sa.DateTime(), nullable=False),
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sa.PrimaryKeyConstraint('id')
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)
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op.create_table('users',
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sa.Column('id', sa.String(length=36), nullable=False),
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sa.Column('email', sa.String(length=255), nullable=False),
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sa.Column('name', sa.String(length=255), nullable=False),
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sa.Column('password_hash', sa.Text(), nullable=True),
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sa.Column('role', sa.String(length=20), nullable=False),
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sa.Column('status', sa.String(length=20), nullable=False),
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sa.Column('created_at', sa.DateTime(), nullable=False),
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sa.Column('updated_at', sa.DateTime(), nullable=False),
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sa.PrimaryKeyConstraint('id'),
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sa.UniqueConstraint('email')
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)
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op.create_table('invitation_tokens',
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sa.Column('token', sa.String(length=36), nullable=False),
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sa.Column('user_id', sa.String(length=36), nullable=False),
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sa.Column('expires_at', sa.DateTime(), nullable=False),
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sa.Column('used_at', sa.DateTime(), nullable=True),
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sa.ForeignKeyConstraint(['user_id'], ['users.id'], ondelete='CASCADE'),
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sa.PrimaryKeyConstraint('token')
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)
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op.create_table('password_reset_tokens',
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sa.Column('token', sa.String(length=36), nullable=False),
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sa.Column('user_id', sa.String(length=36), nullable=False),
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sa.Column('expires_at', sa.DateTime(), nullable=False),
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sa.Column('used_at', sa.DateTime(), nullable=True),
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sa.ForeignKeyConstraint(['user_id'], ['users.id'], ondelete='CASCADE'),
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sa.PrimaryKeyConstraint('token')
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)
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op.create_table('projects',
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sa.Column('id', sa.String(length=36), nullable=False),
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sa.Column('user_id', sa.String(length=36), nullable=True),
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sa.Column('name', sa.String(length=255), nullable=False),
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sa.Column('status', sa.String(length=50), nullable=False),
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sa.Column('analysis_summary', sa.Text(), nullable=True),
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sa.Column('simulation_requirement', sa.Text(), nullable=True),
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sa.Column('chunk_size', sa.Integer(), nullable=False),
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sa.Column('chunk_overlap', sa.Integer(), nullable=False),
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sa.Column('active_task_id', sa.String(length=36), nullable=True),
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sa.Column('created_at', sa.DateTime(), nullable=False),
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sa.Column('updated_at', sa.DateTime(), nullable=False),
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sa.ForeignKeyConstraint(['active_task_id'], ['tasks.id'], ondelete='SET NULL'),
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sa.ForeignKeyConstraint(['user_id'], ['users.id'], ondelete='CASCADE'),
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sa.PrimaryKeyConstraint('id')
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)
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op.create_table('system_config',
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sa.Column('key', sa.String(length=100), nullable=False),
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sa.Column('value', sa.Text(), nullable=True),
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sa.Column('value_type', sa.String(length=20), nullable=False),
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sa.Column('group', sa.String(length=50), nullable=False),
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sa.Column('label', sa.String(length=255), nullable=False),
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sa.Column('description', sa.Text(), nullable=False),
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sa.Column('is_secret', sa.Boolean(), nullable=False),
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sa.Column('updated_at', sa.DateTime(), nullable=False),
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sa.Column('updated_by', sa.String(length=36), nullable=True),
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sa.ForeignKeyConstraint(['updated_by'], ['users.id'], ondelete='SET NULL'),
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sa.PrimaryKeyConstraint('key')
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)
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op.create_table('ontologies',
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sa.Column('id', sa.String(length=36), nullable=False),
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sa.Column('project_id', sa.String(length=36), nullable=False),
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sa.Column('version', sa.Integer(), nullable=False),
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sa.Column('entity_types', sa.JSON(), nullable=True),
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sa.Column('edge_types', sa.JSON(), nullable=True),
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sa.Column('created_at', sa.DateTime(), nullable=False),
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sa.ForeignKeyConstraint(['project_id'], ['projects.id'], ondelete='CASCADE'),
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sa.PrimaryKeyConstraint('id')
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)
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op.create_table('project_files',
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sa.Column('id', sa.String(length=36), nullable=False),
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sa.Column('project_id', sa.String(length=36), nullable=False),
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sa.Column('original_name', sa.String(length=255), nullable=False),
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sa.Column('storage_path', sa.Text(), nullable=False),
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sa.Column('size', sa.Integer(), nullable=False),
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sa.Column('mime_type', sa.String(length=100), nullable=False),
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sa.Column('file_type', sa.String(length=30), nullable=False),
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sa.Column('created_at', sa.DateTime(), nullable=False),
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sa.ForeignKeyConstraint(['project_id'], ['projects.id'], ondelete='CASCADE'),
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sa.PrimaryKeyConstraint('id')
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)
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op.create_table('graphs',
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sa.Column('id', sa.String(length=36), nullable=False),
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sa.Column('project_id', sa.String(length=36), nullable=False),
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sa.Column('ontology_id', sa.String(length=36), nullable=True),
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sa.Column('backend', sa.String(length=20), nullable=False),
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sa.Column('external_id', sa.Text(), nullable=True),
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sa.Column('status', sa.String(length=20), nullable=False),
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sa.Column('node_count', sa.Integer(), nullable=True),
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sa.Column('edge_count', sa.Integer(), nullable=True),
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sa.Column('created_at', sa.DateTime(), nullable=False),
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sa.Column('updated_at', sa.DateTime(), nullable=False),
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sa.ForeignKeyConstraint(['ontology_id'], ['ontologies.id'], ondelete='SET NULL'),
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sa.ForeignKeyConstraint(['project_id'], ['projects.id'], ondelete='CASCADE'),
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sa.PrimaryKeyConstraint('id')
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)
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op.create_table('simulations',
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sa.Column('id', sa.String(length=36), nullable=False),
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sa.Column('project_id', sa.String(length=36), nullable=False),
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sa.Column('graph_id', sa.String(length=36), nullable=True),
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sa.Column('status', sa.String(length=30), nullable=False),
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sa.Column('platform', sa.String(length=20), nullable=False),
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sa.Column('config', sa.JSON(), nullable=True),
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sa.Column('profiles_path', sa.Text(), nullable=True),
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sa.Column('db_path', sa.Text(), nullable=True),
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sa.Column('actions_path', sa.Text(), nullable=True),
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sa.Column('rounds_total', sa.Integer(), nullable=True),
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sa.Column('rounds_completed', sa.Integer(), nullable=False),
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sa.Column('created_at', sa.DateTime(), nullable=False),
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sa.Column('updated_at', sa.DateTime(), nullable=False),
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sa.ForeignKeyConstraint(['graph_id'], ['graphs.id'], ondelete='SET NULL'),
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sa.ForeignKeyConstraint(['project_id'], ['projects.id'], ondelete='CASCADE'),
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sa.PrimaryKeyConstraint('id')
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)
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op.create_table('reports',
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sa.Column('id', sa.String(length=36), nullable=False),
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sa.Column('project_id', sa.String(length=36), nullable=False),
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sa.Column('simulation_id', sa.String(length=36), nullable=True),
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sa.Column('graph_id', sa.String(length=36), nullable=True),
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sa.Column('status', sa.String(length=30), nullable=False),
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sa.Column('outline', sa.JSON(), nullable=True),
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sa.Column('storage_prefix', sa.Text(), nullable=True),
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sa.Column('created_at', sa.DateTime(), nullable=False),
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sa.Column('updated_at', sa.DateTime(), nullable=False),
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sa.ForeignKeyConstraint(['graph_id'], ['graphs.id'], ondelete='SET NULL'),
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sa.ForeignKeyConstraint(['project_id'], ['projects.id'], ondelete='CASCADE'),
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sa.ForeignKeyConstraint(['simulation_id'], ['simulations.id'], ondelete='SET NULL'),
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sa.PrimaryKeyConstraint('id')
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)
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# ### end Alembic commands ###
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def downgrade() -> None:
|
||||
"""Downgrade schema."""
|
||||
# ### commands auto generated by Alembic - please adjust! ###
|
||||
op.drop_table('reports')
|
||||
op.drop_table('simulations')
|
||||
op.drop_table('graphs')
|
||||
op.drop_table('project_files')
|
||||
op.drop_table('ontologies')
|
||||
op.drop_table('system_config')
|
||||
op.drop_table('projects')
|
||||
op.drop_table('password_reset_tokens')
|
||||
op.drop_table('invitation_tokens')
|
||||
op.drop_table('users')
|
||||
op.drop_table('tasks')
|
||||
# ### end Alembic commands ###
|
||||
Loading…
Reference in New Issue