Add opt-in bounded OpenTelemetry diagnostics across host preparation, scoped files, repository checkpoints, transport phases, and native execution. Preserve context parentage and stream cleanup, and retain diagnostic batches without per-file log writes.
Build qualification packs through the canonical frozen provider stage so lockfile, interpreter, and compiled bytes match the sandbox image. Keep ignored untracked repository files out of durable checkpoints.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Match the native runner's approved external-sandbox mode so Codex tools can reach the loopback API and Git credential bridge. Preserve local and restricted permission modes; verify the serialized launch environment.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Honor the native duplex opt-in and align repeat-safe credential acquisition with the file bridge response budget, without retrying Git commands.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Normalize the provider-pack layout independently of runnerd build order and compare verified content rather than revision provenance, avoiding unnecessary multi-gigabyte uploads.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Keep runtime-owned command snapshots reusable until cleanup and observe optional prompt-start rejection without hiding it from callers.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Expose the existing finalization timestamp through the scoped sync API and reject periodic-only or out-of-run saves.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Accept bounded Codex deprecation notices after a settled turn and require that capability before reusing a sandbox image runner. Stage replacement artifacts atomically so existing launchers and image symlink targets survive interrupted uploads.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Bind validated OpenCode result notifications to the active provider process and turn, matching semantic tool responses. Reproduce the live shutdown failure and verify exact durable authority after interruption.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Park idle native sandbox sessions before app shutdown, adopt retained legacy workspaces without restaging Git, and carry explicitly bound GitHub access through both OpenCode launch filters.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Select Codex ACP's full-access initial mode only for host-validated external work-folder environments with approve-all authority. Keep local and restrictive permission modes unchanged. The regression failed before the fix; all 50 ACP environment and runtime tests pass.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Keep custom profile-provided runtimes available while restoring the projected Git launcher before agent startup.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Preserve migration SQL hashes when renumbering and keep sandbox HOME with managed GitHub shell profiles.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Codex filters explicit environment overrides through include_only. Retain the scoped home and standard executable path without allowing provider or host secrets into shell commands.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Codex filters explicit environment overrides through include_only. Retain the scoped home and standard executable path without allowing provider or host secrets into shell commands.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Keep the execution target identity through workspace realization, restore its saved home for finalization, and distinguish warm setup reuse from replacement dependency recovery. Label direct file updates separately from agent checkpoints.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Keep the execution target identity through workspace realization, restore its saved home for finalization, and distinguish warm setup reuse from replacement dependency recovery. Label direct file updates separately from agent checkpoints.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - Several people can send instructions to the same agent and task.
> - A fixed GitHub token in the provider process can keep the first
person's access after another person's message is accepted.
> - Task ownership cannot select credentials for each accepted
instruction or preserve the identity of an operation already in
progress.
> - This pull request records ordered execution identity contexts and
resolves credentials when managed Git, gh, or GitHub tools start.
> - The benefit is automatic personal GitHub access for shared agents,
with durable continuation rules and no teammate credential fallback.
## Linked Issues or Issue Description
**Subsystem affected**
Cross-cutting: orchestration, connection grants, database, runtime
adapters, native runners, and run details.
**Problem or motivation**
A shared agent must use the person whose instructions it has accepted. A
queued message must retain its author. A retry or approval without new
instructions must retain the originating identity. GitHub must remain
optional for ordinary work.
**Proposed solution**
Persist execution identity separately from task ownership. Give new
processes a run-scoped broker capability and token-free managed
launchers. Capture identity at operation start. Keep an explicit
dedicated-agent grant as an override. Show redacted diagnostics in run
details.
**Alternatives considered**
Per-task ownership, fixed provider tokens, and mutable repository author
configuration do not handle accepted steering or concurrent operations.
A manual account-selection action would add unnecessary setup to each
turn.
**Roadmap alignment**
This completes the existing Multiple Human Users, MCP Tool Gateway &
Apps, Secrets Manager, and Self-healing Runs capabilities. The
implementation follows the maintainer-approved plan.
Related work: Refs #12843, Refs #12907. Existing proposals #4618 and
#8945 cover per-agent or per-worktree author configuration. This change
instead follows the accepted human instruction across runtime types.
Refs #11831 for governed personal connection delegation; this change
preserves connection audience checks and does not use standing
delegation as a personal credential fallback.
## What Changed
- Add durable, ordered identity contexts and active run references.
Preserve message authors through consolidation, steering, retries,
delegation, approvals, routines, and restart.
- Add an authenticated operation-time GitHub credential broker and
local/remote managed git and gh launchers. Keep personal tokens out of
the long-lived provider process.
- Resolve GitHub gateway and server-side Git operations through the same
responsible-person or dedicated-grant selection rules.
- Make absent and unavailable GitHub credentials non-blocking at generic
startup. Clear host and prior-person credentials. Keep anonymous Git
access where supported.
- Add run-detail identity history and the dedicated-account warning.
Keep task ownership and queue-versus-steer decisions unchanged.
- Preserve personal OAuth declarations through connection edits. Retain
exact selected grants in the gateway.
- Fix continuation races found during real acceptance: verify a warm
owner before credential rotation, and wait for bounded durable runner
suspension before the next run starts.
- Make migrations replay-safe. Retain identity through agent/run
deletion, remove it with its company, and clean terminal launcher
directories before releasing execution environments. Document
coordinated release and rollback.
## Verification
- Full workspace typecheck, build, and token gates passed. The complete
local suite passed in its normal test groups: 17,120 passing tests,
including all 143 serialized server suites. After integrating the newly
merged runner API work, full local typecheck and build passed again,
along with 890 focused integration tests. All 31 checks on the
integrated revision passed, including build, browser E2E, release
registry, canary dry run, typecheck, security and all test suites.
Greptile is 5/5 with all review threads resolved.
- Current focused checks passed: 142 native executor tests, 67 runtime
lifecycle tests, 9 durable identity tests, 75 credential/routine tests,
19 low-trust/resumption tests, and the executable migration replay test.
- Authenticated browser acceptance with two Paperclip users and two
GitHub accounts on one shared native agent passed. Real commits and
pushes followed A → B accepted steering → queued A continuation in the
same saved conversation. GitHub commit author and committer identities
matched all three operations. Both runs succeeded and task ownership
stayed unchanged.
- Real GitHub MCP calls switched from A to B after accepted steering. A
delegated subtask retained its originating identity across a server
restart.
- Disabling B's GitHub connection left ordinary work successful. Managed
gh was unauthenticated and the provider had no inherited GH_TOKEN or
GITHUB_TOKEN.
- The browser displayed run-detail diagnostics and the exact
dedicated-account warning. A final controller-restart check followed by
another-person continuation retained the conversation, selected the
correct GitHub login and Git author, and removed each terminal launcher
directory.
- Company-lifetime migration and all five previously failing CI suites
passed locally (167 tests). Same-token gateway A → B → A and six
broker/launcher boundary tests passed.
- Remote callback, launcher, sandbox, and runtime contract tests passed.
Both native and legacy Codex completed actual Daytona executions on the
integrated revision ([campaign
results](https://github.com/paperclipai/paperclip/actions/runs/34155056509)).
The remote package-manager shim staging regression also passed locally.
## Risks
- Deploy the migrations, server broker, launchers, and runner artifacts
together. Existing processes finish with their original contract. New
managed processes need the broker endpoint for GitHub operations.
- Finish or stop new managed executions before rolling application code
back. Keep the additive schema and identity history during rollback.
- Scripts that require a persistent raw GH_TOKEN must use managed git,
gh, or GitHub gateway tools. Run capabilities authorize code executing
within that run to acquire its current identity; this is not
hostile-code isolation within one execution principal. Managed commands
prevent automatic credential carryover; arbitrary code deliberately
copying a credential is outside that boundary.
- Uncertain steering acknowledgement deliberately holds new credential
acquisition until reconciliation. Already-started operations retain
their captured identity.
- GitHub private access and provider outages can still fail the specific
operation that needs them. Dedicated grant failure does not fall back to
personal access.
## Model Used
OpenAI GPT-6 through Codex assisted implementation, review, shell
execution, and browser acceptance. The exact model variant and
context-window size are not exposed in this session. Tool use included
TypeScript and Rust tests, database integration tests, GitHub CLI, and
authenticated browser control.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip manages AI agents and their work.
> - The new runner gives agents dedicated tools for common tasks.
> - Some API operations and parameters have no dedicated tool.
> - Agents need a controlled way to find and use those operations.
> - This pull request adds API search and calls through the real server
routes.
> - Existing tools remain the preferred path. The new tools are disabled
by default.
> - Paired tests measure correctness, tool choice, cost and time.
## Linked Issues or Issue Description
**Subsystem affected**
Paperclip Runner contracts, production tool authority and the server API
catalog.
**Problem or motivation**
The runner cannot use much of the API described by the old Paperclip
skill. A generic HTTP client would also let agents bypass runner control
rules.
**Proposed solution**
Add `search_api` and `call_api`. Resolve calls from the mounted API
catalog. Use server-held, run-bound credentials. Preserve route checks
and runner lifecycle rules. Keep the tools disabled until an operator
enables selected companies.
**Alternatives considered**
A dedicated tool for every endpoint would add a large initial prompt. An
unrestricted HTTP tool would weaken authorization and replay controls.
**Roadmap alignment**
This extends the native runner tooling. The repository owner requested
this design and implementation. The roadmap and related open PRs were
checked. No duplicate API escape-hatch PR was found.
## What Changed
- Register two compact fallback tools in canonical contracts and
provider projections.
- Build deterministic API discovery from OpenAPI, mounted experimental
routes and the old skill reference.
- Execute bounded JSON, text, file and download requests through
authenticated HTTP routes.
- Recheck active runs, company access and work modes. Block runner
lifecycle, scheduling, credential and approval bypasses. Keep routine
annotation collaboration available.
- Retain mutation receipts. Report uncertain outcomes without blindly
repeating writes.
- Add a company rollout gate and a durable eval worker with complete
cost accounting checks.
- Record child-task creation in the activity log with the agent and run.
- Add contract, authorization, file, replay and real runnerd/PRP/HTTP
tests.
- Document rollout gates and paid coverage limits. The companion eval
repository retains immutable attempts and reports.
## Verification
- Final app commit `da58370524c3626a744eec20164397c5fb6ba9ef`: all 32
checks passed; the unrelated Storybook visual check was skipped.
Greptile 5/5; no unresolved review threads.
- Full Linux build and recursive typecheck passed. Repository tests were
run by project and serialized shard; all 143 serialized server suites
passed.
- Runner TypeScript: 1,599 passed, two skipped. Rust release: 451
passing test reports. Conformance and replay parity passed. The required
API check passed 837 tests, including runnerd → PRP → authority → real
HTTP.
- Bindings cannot enable API tools without the explicit deployment flag.
Unit and real-authority tests prove the default-off boundary.
- The standalone API check builds and stages its own binary. It passed
after existing staged and debug binaries were removed from the test
container.
- UI and CLI tests passed. Initial environment failures (missing jq,
Docker overlay file identity, and parallel linker memory pressure) and
focused passing reruns are retained. The macOS full runner suite has
platform-specific failures; Linux is the qualified full-check platform.
- Eval harness: 27 tests passed; existing CI discovery ran 86 tests with
two unrelated skips. Credential export rejection is tested against the
actual report command.
- Luna and OpenRouter Sonnet each passed 60 common-workflow runs: ten
workflows, three repetitions per arm, zero unnecessary API fallback.
- Sonnet passed 11 selected capability/contract cases after fixes.
Gemini passed three smoke cases. DeepSeek exceeded the 120-second limit
and remains unqualified.
- Luna's two cost flags received focused follow-up. The original flags
and a later n=1 latency flag remain visible. Sonnet had no cost or
latency increase above 20%.
- The catalog contains 785 entries; 58 were exercised across all stages.
Most operation probes remain unrun and some need additional fixtures.
Authored probes do not establish successful coverage.
- Total conservative accounted cost: $9.875960. Active paid-campaign
time: 88.16/90 minutes. No missing accounting. Later security and
harness fixes have provider-free verification; no paid validation is
claimed for those revisions.
- Inspect the [qualification
report](https://github.com/paperclipai/paperclip-evals/blob/codex/seach-call-api-tools/evals/runner-api-tools/reports/2026-09-07-production/READINESS.md)
and [verification
record](https://github.com/paperclipai/paperclip-evals/blob/codex/seach-call-api-tools/evals/runner-api-tools/reports/2026-09-07-production/verification.json).
## Risks
- This is a broad authenticated API surface. Keep the default-off gate
until an operator selects initial rollout companies.
- Paid coverage is incomplete. Small regression samples do not prove all
workflows are unchanged.
- A timeout or server failure can follow a committed mutation. The
result reports an unknown outcome and requires state inspection.
- The new definitions add prompt tokens. The report retains cost flags
and cache variation.
- No database migration is required.
- Repository rules require code-owner approval before merge. Technical
CI and automated review are complete.
## Model Used
OpenAI Codex based on GPT-6 assisted with code, tests and review. The
exact serving model ID and context window are not exposed in this
session. It used reasoning, tool calls and code execution.
Eval models: `gpt-5.6-luna` with low reasoning,
`openrouter/anthropic/claude-sonnet-5`,
`openrouter/google/gemini-3.8-flash`, and
`openrouter/deepseek/deepseek-v4-flash-0731`. Attempts retain runtime
versions, model identity, usage and source provenance.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
Preserve JSON Content-Type when custom idempotency headers are supplied. Expose the latest accepted folder operation timestamp so browser saves remain visible before an agent runs and after all files are deleted.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Resume retained ephemeral leases, pin managed-agent imports against link replacement, carry scoped home settings through native provider boundaries, and keep file transfer arguments below Linux limits. Restrict acceptance exclusions to the engines explicitly deferred by the user.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Use object-storage artifact URLs and Actions build artifacts without creating releases. Fix both native session entry points, preserve the primary workspace environment, and declare upload headers in OpenAPI. Tests cover sandbox home confinement, session dispatch, and generated headers.
Co-Authored-By: Paperclip <noreply@paperclip.ing>
Introduce company-scoped task, agent, user and project files, recoverable trash, object-backed repository checkpoints, and a shared 180-second lifecycle for sandbox execution. Wire file browsing and save status into the owner surfaces. This is an implementation checkpoint; staging acceptance and the complete merge gate remain outstanding.
## Thinking Path
- Paperclip Runner needs its runtime preinstalled for fast sandbox
startup.
- Native and local adapters should launch one current CLI installation
per provider.
- An older global copy can shadow that installation, and exact native
compatibility pins must match it.
- Update the qualified releases and binary digests, expose shared CLI
entrypoints from the provider pack, and prefer the image-owned bin
directory.
- Keep dependency installation in the image build; task startup only
discovers, links, and verifies artifacts.
## Linked Issues or Issue Description
**What happened?**
Remote native startup rejected a stale global Codex, while CLI-only
images lacked runnerd entirely.
**Expected behavior**
An image-baked runtime starts without uploading binaries or installing
packages. All adapters share the same current provider CLI.
**Steps to reproduce**
Start a native remote task with the old global Codex and the updated
runtime available only under `/opt/paperclip-runner/bin`.
**Paperclip version or commit**
Discovery behavior at `54a99d884`.
**Deployment mode**
Docker with a remote sandbox.
## What Changed
- Prefer `/opt/paperclip-runner/bin`, then the user's local bin
directory, then PATH. Existing metadata and version validation remains
in force.
- Qualify Codex 0.153.4, OpenCode 1.18.29, and Claude SDK 0.3.263 / CLI
2.1.263. Update binary digests, TypeScript/Rust checks, registry
defaults, and the displayed OpenCode version together.
- Share Codex and Claude's native executable with the ACP bridges
through exact dependency overrides. Preserve the separately qualified
ACP bridge implementations and their security patches.
- Expose shared provider-pack CLI launchers; fail the pack build if
Codex ACP resolves a separate Codex installation. Update the eval
image's other agent CLIs to current stable releases and remove duplicate
global provider installs.
- Document the single-current-CLI policy in source comments and
development guidance. Latest stable releases are resolved at
review/build preparation and pinned; task startup never auto-updates.
## Verification
- Native-session and adapter-registry suites: 158 tests passed.
- Provider suites: 88 tests passed, 7 Linux-only checks skipped on
macOS. One existing macOS temporary-path alias assertion passed when
rerun with canonical `TMPDIR=/private/tmp`.
- Package-contract and OpenCode materialization tests: 11 passed.
- Full typecheck, build, and token gates passed. Rust
native-provider/recovery tests: 19 passed.
- Broad local suite: 5,974 passed, 23 failed, 41 skipped. Failures are
in unchanged macOS workspace/path/port and connection suites; focused
runtime tests pass. All latest-head Linux PR checks passed, including
the full test shards, typecheck, build, runner verification, browser
suites, and canary dry run.
- The standalone fleet image built with one current provider CLI each
and passed native Codex/Claude binary-integrity checks. A disposable
Daytona sandbox reported ready in 798 ms; its baked runner completed an
API-key `gpt-5.6-luna` turn in 2,430 ms and returned the expected marker
with a usage receipt. No runtime artifacts were uploaded or installed.
- The normal shared `codex exec` entrypoint also completed an API-key
`gpt-5.6-luna` turn in 2,321 ms.
- Both image builds verify the complete generated lockfile against a
reviewed SHA-256 before package installation or lifecycle execution.
Root lockfile changes remain CI-owned. Merge and rollout remain on hold
for operator review.
## Risks
- Updating provider CLIs changes their behavior for all adapters;
version probes and live native smoke testing are required before image
promotion.
- The image-owned directory takes precedence. Its entries must launch
the same shared CLI as the global PATH, not a private older/newer copy.
- Application qualification pins and the deployed image must move
together. No startup fallback installation is added.
- No schema or authentication-policy changes.
## Model Used
OpenAI GPT-6 (Codex). The session does not expose a more specific model
ID or context-window size. Used reasoning, repository inspection, code
execution, and browser verification.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - GitHub connections give agents access to approved repositories.
> - One GitHub identity can use installations across several
organizations.
> - The permissions page linked to one installation and showed an
unfiltered list.
> - Users could not easily find another organization or inspect a large
selection.
> - This change adds account filtering, search, and access configuration
links.
> - Users can inspect repository access in one compact view.
## Linked Issues or Issue Description
Refs #12993. Related repository-catalog work in #11228 and #11234 was
checked. This change only improves the existing GitHub connection
permissions page.
**What existing behavior does this improve?**
The GitHub connection permissions page and its repository display
metadata.
**Current behavior**
The page links directly to an existing installation. The repository list
has no account filter, search, height limit, or private-repository
marker. Refresh access occupies a separate section.
**Proposed behavior**
Show all authorized repositories by default. Filter by account or
organization and search by name. Open GitHub's account chooser to
configure access across organizations. Show GitHub icons and
private-repository locks. Keep refresh beside configuration and limit
the visible list to about ten rows.
**Reason and benefit**
Users can find repositories across organizations and configure missing
access without creating another GitHub identity. Large repository lists
no longer fill the page.
**Breaking changes**
None. Repository display metadata gains an optional private flag. Older
snapshots remain valid and gain the flag after access refresh. No SQL
migration is required.
## What Changed
- Add an All accounts view, account filter, search, and empty states.
- Link both configuration controls to GitHub's app account chooser.
- Place an accessible refresh icon beside the configuration button.
- Keep the repository heading and list in one section.
- Add GitHub icons and private-repository locks.
- Cap the scrollable list at ten rows using a design token.
- Persist GitHub's private flag only when the provider returns a
boolean.
- Recover missing legacy app configuration from GitHub installation
metadata.
- Update tests and the GitHub connection runbook.
## Verification
- Focused tests passed: 54 permissions-page tests and four GitHub
metadata tests.
- UI and server typechecks passed before submission. Token gates passed.
- Browser checks verified account filtering, search, empty results, and
the configuration destination.
- The live list contained 40 repositories. Its final height was 272
pixels, which fits ten single-line rows with gaps. Scrolling retained
all rows.
- A live access refresh populated 30 private-repository lock icons from
GitHub metadata.
- Full workspace typecheck and build passed. The broad local suite
stopped in the general-server group with 18 failed files. Failures
include macOS temporary-path handling and embedded PostgreSQL startup.
That run also overlapped the legacy fix and retained a stale GitHub
module; the final focused run passed all 58 tests. Clean-runner CI is
tracked separately.
- Latest-head review is 5/5 with the legacy chooser finding resolved.
All CI checks passed on commit
`0ff2b63f348f5c87d8b7df6e43388f60f5d872d9`, including build, typecheck,
all test shards, browser tests, and canary dry run.
## Risks
- Older repository snapshots lack visibility metadata until refreshed.
Unknown visibility does not display a lock.
- The account filter lists authorized installation owners. Users add
other organizations through GitHub's chooser.
- Filtering changes only the displayed list. GitHub remains
authoritative for repository access.
## Model Used
OpenAI GPT-6 (`gpt-6-astra`) via Codex. Reasoning, code execution, and
browser tools were used. The exact context window size was not exposed.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
## Thinking Path
> - Paperclip is the open source app people use to manage AI agents for
work.
> - GitHub connections give agents an account with selected repository
access.
> - Fresh local instances enroll with production Paperclip Cloud.
> - Enrollment could finish while the GitHub OAuth profile remained
disabled.
> - Setup then switched to a personal access token form without
explanation.
> - This change preserves sign-in intent and shows the connected account
and repositories.
## Linked Issues or Issue Description
Related: #12907, #12943, #12947. Existing open GitHub connection work
was checked. No duplicate was found.
**What happened?**
After Cloud enrollment, a fresh test-drive asked for a GitHub key.
Production did not advertise the managed GitHub profile. Staging did.
The permissions page also omitted the authenticated username and
repository names.
**Expected behavior**
Continue with GitHub OAuth when available. Explain unavailable sign-in
and allow retry otherwise. Show the GitHub username and complete
accessible repository list.
**Steps to reproduce**
Start a fresh test-drive. Choose GitHub and complete instance enrollment
while the Cloud GitHub profile is disabled. Open an existing GitHub
connection's permissions page.
## What Changed
- Preserve managed sign-in intent when the gallery omits its profile.
- Refresh the selected gallery entry on retry without resetting the
audience.
- Fetch all pages of GitHub installations and repositories.
- Store only repository IDs, full names, and installation IDs in grant
metadata.
- Show the GitHub username, repository list, management link, and
refresh action.
- Discard the repository snapshot after newer installation lifecycle
events. Preserve snapshots verified after delayed events.
- Lock and re-read grant metadata when applying installation events or
saving refreshed access. Patch only webhook fields for other events.
Reject snapshots if access changed during the external fetch, using
unique access revisions even when timestamps collide.
- Show repository installation recovery for managed OAuth even when the
app also offers an advanced PAT method.
- Update tests and the GitHub connection runbook. No SQL migration is
required.
## Verification
- Local typecheck, build, and token gates passed. All latest-head CI
gates passed, including the complete test matrix and browser suites.
Greptile is 5/5 with no unresolved findings.
- All 382 focused setup, permissions, metadata, service, and webhook
tests passed across final runs. One socket-hang-up test passed on rerun
with the full service suite. Final service, metadata, and webhook checks
passed all 230 tests.
- The broad local suite was stopped after failures. Seven
workspace-runtime exposure and control-conflict failures reproduce on
base commit `54a99d884`. The broad run also overlapped local iteration;
final focused tests and clean-checkout CI are tracked separately.
- Browser: a fresh production-backed instance completed enrollment,
retried after profile enablement, reached GitHub consent, recovered from
a missing installation, and completed OAuth.
- Browser: the permissions page showed the authenticated username and
the selected private test repository. A real `get_me` call returned the
same account. Reading the selected repository passed; reading an
unselected private repository failed with 404.
- Browser: a second fresh instance completed enrollment and OAuth
without a PAT form or unavailable state. Its username and repository
list survived reload and refresh. A real get_me call on the final code
returned the displayed account.
## Risks
- Repository names are now stored in company-scoped grant metadata and
shown with that credential. They are display data, not authorization
data.
- Large selections require more GitHub API calls. A failed later page
rejects the refresh rather than reporting a partial list.
- Older grants and webhook-invalidated snapshots require Refresh access
to load the list.
- Cloud profile enablement is separate deployment configuration. This PR
does not change OAuth scopes or GitHub App permissions.
## Model Used
OpenAI GPT-6 (`gpt-6-astra`) via Codex. Reasoning, code execution, and
browser tools were used. The exact context window size was not exposed.
## Checklist
- [x] I have included a thinking path that traces from project context
to this change
- [x] I have specified the model used (with version and capability
details)
- [x] I have checked ROADMAP.md and confirmed this PR does not duplicate
planned core work
- [x] I have searched GitHub for duplicate or related PRs and linked
them above
- [x] I have either (a) linked existing issues with `Fixes: #` / `Closes
#` / `Refs #` OR (b) described the issue in-PR following the relevant
issue template
- [x] I have not referenced internal/instance-local Paperclip issues or
links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip`
URLs)
- [x] My branch name describes the change (e.g. `docs/...`, `fix/...`)
and contains no internal Paperclip ticket id or instance-derived details
- [x] I have run tests locally and they pass
- [x] I have added or updated tests where applicable
- [x] I have updated relevant documentation to reflect my changes
- [x] I have considered and documented any risks above
- [x] All Paperclip CI gates are green
- [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups
- [x] I will address all Greptile and reviewer comments before
requesting merge
---------
Co-authored-by: Paperclip <noreply@paperclip.ing>
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