## Thinking Path > - Paperclip is the open source app people use to manage AI agents for work. > - The board UI, plugin examples, and plugin SDK all share the same React dependency graph. > - Dependabot PR #8471 raised `react` and `@types/react`, but left `react-dom` and `@types/react-dom` on older 19.x ranges. > - That let dependency resolution install incompatible React runtime versions, which makes React refuse to run and breaks UI-oriented test suites. > - Current PR policy keeps `pnpm-lock.yaml` owned by CI for non-dependabot authors, so this PR updates manifests and lets CI regenerate the lockfile artifact. > - This pull request replaces #8471 with a complete React toolchain alignment across the package manifests it touched. > - The benefit is a single React 19.2.7 runtime graph that keeps dependency consumers from deduping onto a stale `react-dom` patch. ## Linked Issues or Issue Description Refs #8471 This PR replaces #8471, which updated `react` and `@types/react` but left `react-dom` and `@types/react-dom` behind. The resulting dependency graph can install mismatched `react` and `react-dom` versions, producing React's incompatible-version runtime error in UI tests. ## What Changed - Aligned `react-dom` package ranges to `^19.2.7` anywhere the React dependency set is present. - Aligned `@types/react-dom` package ranges to the 19.2 line. - Kept the `react@^19.2.7` and `@types/react@^19.2.17` bumps from #8471. - Added root pnpm overrides for `react` and `react-dom` so peer-only consumers resolve to the same 19.2.7 runtime instead of a stale patch. - Left `pnpm-lock.yaml` out of the PR, per the PR workflow policy; CI regenerates and shares the lockfile artifact when manifests change. ## Verification - `cd ui && NODE_ENV=test npx vitest run` passed locally before handoff: 243 files / 1739 tests. - `NODE_ENV=development pnpm install --lockfile-only --ignore-scripts --no-frozen-lockfile` passed locally on the rebased branch. - Confirmed regenerated `pnpm-lock.yaml` resolves `react` and `react-dom` to 19.2.7 and contains no `react@19.2.4` / `react-dom@19.2.4` entries. - GitHub Actions are green on this PR, including `policy`, `Typecheck + Release Registry`, all general test shards, `Build`, `e2e`, and `verify`. - Greptile completed at 5/5 with zero unresolved threads. ## Risks Low risk. This is a dependency-version alignment only, but React dependency changes can expose package-manager resolution issues. The root overrides intentionally constrain the React runtime pair to the same patch version to avoid that class of failure. ## Model Used OpenAI Codex based on GPT-5, using command-line tool execution and GitHub CLI operations in a Paperclip-managed workspace. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have checked ROADMAP.md and confirmed this PR does not duplicate planned core work - [x] I have searched GitHub for duplicate or related PRs and linked them above - [x] I have either (a) linked existing issues with `Fixes: #` / `Closes #` / `Refs #` OR (b) described the issue in-PR following the relevant issue template - [x] I have not referenced internal/instance-local Paperclip issues or links (only public GitHub `#NNN` / `github.com/paperclipai/paperclip` URLs) - [x] My branch name describes the change (e.g. `docs/...`, `fix/...`) and contains no internal Paperclip ticket id or instance-derived details - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] All Paperclip CI gates are green - [x] Greptile is 5/5 with no open P2s, recommendations, or follow-ups - [x] I will address all Greptile and reviewer comments before requesting merge Co-authored-by: Paperclip <noreply@paperclip.ing> |
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| fixtures/basic-root | ||
| migrations | ||
| skills | ||
| src | ||
| templates | ||
| tests | ||
| .gitignore | ||
| README.md | ||
| esbuild.config.mjs | ||
| package.json | ||
| rollup.config.mjs | ||
| tsconfig.json | ||
| vitest.config.ts | ||
README.md
LLM Wiki
Local-file LLM Wiki plugin for source ingestion, wiki browsing, query, lint, and maintenance workflows.
Scope
This package is the standalone home for LLM Wiki behavior. Wiki-specific routes, UI, prompts, tools, local-folder templates, migrations, fixtures, and tests live here rather than in Paperclip core.
The alpha surface includes:
- manifest-declared Wiki page, sidebar entry, and settings page
- trusted local folder declaration for
raw/,wiki/,AGENTS.md,IDEA.md,wiki/index.md, andwiki/log.md - plugin database namespace migration for wiki instances, sources, pages, operations, query sessions, and resource bindings
- managed
Wiki Maintaineragent, managedLLM Wikiproject, and paused managed routines for wiki update processing, lint, and index refresh - plugin-operation issue creation using
surfaceVisibility: "plugin_operation" - local source capture into
raw/with metadata rows in the plugin DB namespace - opt-in company-scoped Paperclip event ingestion controls for issues, comments, and documents; event ingestion is disabled by default and routes captured raw provenance into the default space only
- manual Paperclip project/root issue distillation and bounded backfill actions with explicit work items, operation issues, source caps, and estimated cost recording
- Paperclip-derived distillation (cursor windows, manual
distill-now, backfill) always writes into the default wiki space in Phase 1; non-default spaces remain on manual / raw-file ingest until per-space Paperclip ingestion profiles ship - Paperclip-derived distillation maintains
wiki/projects/<slug>/standup.mdas the executive current-state view for each represented project, alongside durablewiki/projects/<slug>/index.mdknowledge pages - wiki page writes with plugin path validation, atomic local-folder writes, metadata/revision rows, backlink extraction, and optional stale-hash protection
- wiki tools for search/read/write/propose patch/source/log/index/backlinks workflows
Phase 5 Security Gate
Paperclip-derived text ingestion stays limited to issue titles/descriptions, issue comments, and issue documents.
- Issue attachments/assets are metadata-only in Phase 5.
- Issue work products are metadata-only in Phase 5.
- The wiki must not fetch
/api/assets/:id/content, dereference work-producturlfields, or store those capability-bearing links in source bundles/snapshots.
The accepted policy lives in doc/plans/2026-05-06-llm-wiki-paperclip-asset-security-gate.md.
Development
pnpm install
pnpm dev # watch builds
pnpm dev:ui # local dev server with hot-reload events
pnpm test
From the Paperclip repo root:
pnpm --filter @paperclipai/plugin-llm-wiki typecheck
pnpm --filter @paperclipai/plugin-llm-wiki test
pnpm --filter @paperclipai/plugin-llm-wiki build
Alpha Verification
Run these commands from the Paperclip repo root before handing off alpha plugin changes:
pnpm --filter @paperclipai/plugin-llm-wiki typecheck
pnpm --filter @paperclipai/plugin-llm-wiki test
pnpm --filter @paperclipai/plugin-llm-wiki build
The focused Vitest suite covers:
- standalone package boundaries and package-local harness dependencies
- required local folder bootstrap writes
- raw source capture plus ingest metadata persistence
- hidden plugin-operation issue creation for ingest/query/file-as-page workflows
- disabled and enabled Paperclip event ingestion paths
- managed routine declarations, manual distill/backfill work items, source cap handling, and backfill project/date scoping
- atomic page writes, metadata/revision rows, backlinks, and stale-hash refusal
- query session creation, run-id recording, stream event forwarding, and completion updates
- filing a streamed query answer back into the wiki through a hidden operation
Remaining alpha gaps:
- Browser screenshot capture is maintained separately under
tests/screenshots; generatedscreenshots/outputs are local artifacts and are ignored by git. - Host-level plugin install and live agent invocation still need Paperclip server/runtime smoke coverage when preparing a release candidate.
Install Into Paperclip
curl -X POST http://127.0.0.1:3100/api/plugins/install \
-H "Content-Type: application/json" \
-d '{"packageName":"/Users/dotta/paperclip/.paperclip/worktrees/PAP-3179-design-a-llm-wiki-plugin/packages/plugins/plugin-llm-wiki","isLocalPath":true}'
Build Options
pnpm builduses esbuild presets from@paperclipai/plugin-sdk/bundlers.pnpm build:rollupuses rollup presets from the same SDK.
After changing manifest-loaded assets such as skills, agent instructions, or templates, recompile the local plugin before re-enabling it:
pnpm --filter @paperclipai/plugin-llm-wiki build
The package-local dist/ directory is ignored by git, but local Paperclip
installs load the compiled dist/manifest.js and dist/worker.js files at
runtime. If activation failed before the rebuild, re-enable the plugin or
restart the Paperclip dev server so the host imports the fresh bundle.
Local File Layout
<configured-wiki-root>/
AGENTS.md
IDEA.md
.gitignore
raw/
.gitkeep
wiki/
index.md
log.md
sources/
.gitkeep
projects/
.gitkeep
<project-slug>/
index.md
standup.md
decisions.md
history.md
entities/
.gitkeep
concepts/
.gitkeep
synthesis/
.gitkeep
Use the settings page or bootstrap-root action to configure the folder and
write the starter files. The plugin uses Paperclip's local folder API for path
containment, symlink checks, read/write validation, and atomic writes.
Bootstrap preserves existing files rather than overwriting operator edits. The
default first-install skeleton is copied from the vanilla LLM Wiki layout, with
CLAUDE.md renamed to AGENTS.md and Paperclip project overviews, standups,
decisions, and history kept together under wiki/projects/<slug>/.
Managed Agent Instructions
Plugin-managed agent instruction bundles live under:
agents/<agent-key>/AGENTS.md
For this plugin the Wiki Maintainer source bundle is agents/wiki-maintainer/AGENTS.md.
Any additional files in that folder are installed as sibling instruction files
for the managed agent. The settings health check reports drift from these
defaults, and resetting the managed agent asks for confirmation before replacing
customized instructions.