Commit Graph

11 Commits

Author SHA1 Message Date
Alpamys 76f033a6ff feat(v0.53.10): Quick wins + packaging + UX wiring
7 issues closed:
- #150 [mix] pyproject extra bundles scikit-optimize so `soup data mix
  --optimize` runs the Bayesian loop instead of the v0.48.0 Dirichlet
  fallback; new describe_default_optimizer() helper labels the active
  backend without paying skopt's import cost.
- #113 [data-pro] extras (langdetect + presidio-analyzer) with lazy
  fall-through helpers in utils/data_score (broader language coverage +
  Presidio entity recognition on top of the v0.47.0 regex baseline).
  Llama-Guard-3-1B documented as a manual recipe (license + size).
- #154 SOUP_POSTHOG_KEY / SOUP_POSTHOG_ENDPOINT env override via
  sentinel-based explicit-vs-env precedence; HTTPS-only +
  RFC1918/link-local rejection on the endpoint; null-byte / control-char
  / >256-char rejection on the key.
- #152 --hub flag plumbed on chat / serve / infer / merge / export /
  push via shared utils/hubs.apply_hub_to_cli_model +
  prefetch_model_from_hub helpers; push uses upload_repo (skips
  HF-specific Collections + model-card auto-render on non-HF hubs).
- #153 `soup data download --hub modelscope|modelers` live SDK
  (lifts the v0.53.8 advisory-only path); friendly ImportError
  advisory when the SDK is missing.
- #155 Web UI Tool Outputs panel — `loadToolOutputs` polls
  /api/tool-outputs every 3s; XSS-safe DOM-built table (textContent
  per cell, no innerHTML for user-controlled fields); Bearer token
  threaded via the v0.53.9 window._authToken bootstrap.
- #156 SoupTrainerCallback.on_step_end records tool_calls counts
  from kwargs['inputs'] into the global tool buffer. Best-effort
  (# noqa: BLE001 per project policy — training must never crash).

13 review-fixes applied (4 HIGH / 5 MEDIUM / 4 LOW):
- HIGH PostHog explicit-endpoint precedence sentinel
- HIGH absolute path leak in local_path advisory reduced to relpath
- HIGH Rich markup escape on base / local_path / cache_dir
- HIGH callback # noqa: BLE001 per project policy
- MED `import time` moved out of try block
- MED oversize key + explicit-empty key rejection tests
- MED source-grep regression guards (advisory-removal, helper imports
  across 5 non-push commands)
- MED `prefetch_model_from_hub` outside-cwd cache_root rejection
- LOW empty-list + bool-True tool_calls no-op tests
- LOW push.py uses upload_repo + validate_hub_name regression guard

Test count: 8285 -> 8330 (+45 in tests/test_v05310.py).
Full suite green; ruff clean; on Win+Py3.10.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-14 13:58:20 +05:00
Alpamys bde9d149a0 feat(v0.53.9): Live Dashboard + UX + Bench + Standalone CLIs
Eight features that close out the v0.44.x live-monitoring deferrals
plus a long tail of standalone CLI wins:

- #94  /api/train/stream async SSE with per-subscriber cursor + JS
       EventSource consumer; SoupTrainerCallback pushes TrainEvent on
       each on_log.
- #95  soup ui --public derives LAN IP via SOCK_DGRAM connect-trick,
       prints scannable QR; --auth-token override; SPA bootstrap
       hydrates window._authToken from ?token= + sessionStorage and
       cleans the URL via history.replaceState; CORS regex auto-widens
       to loopback + RFC1918 in public mode; set_auth_token rotation
       race fixed via threading.Lock.
- #98  soup serve --reasoning-parser strips <think>...</think> (and
       OpenThinker tags); pre-compiled regex with marker-token
       fast-path + 1 MiB cap + leading-newline-only strip.
- #100 ToolOutputsBuffer global singleton + /api/tool-outputs JSON
       endpoint; best-effort observation hook in callback.on_log.
- #15  soup tokenizer train: BPE training CLI with raw-path lstat
       symlink rejection, 50 MiB total / 8 KiB per-line caps,
       post-mkdir output-dir re-check, --special-token NUL/oversize
       dedup, vocab bounds [256, 200000].
- #26  soup bench --p50 --p95 renders extra per-prompt tail-latency
       Rich table; --prompts-file gains symlink rejection.
- #28  soup bench --backend auto: MLX weights.npz probe (per-entry
       lstat) -> config.json model_type keyword -> transformers
       fallback; SOUP_BENCH_BACKEND env hint.
- #12  examples/synthetic_workflow.{md,yaml} end-to-end walkthrough.

Review fixes: 0 CRITICAL + 11 HIGH + 14 MEDIUM + 9 LOW across the
python / code / security / tdd review agents. Notable HIGH:
- QR token now consumed by SPA (was unreachable previously).
- set_auth_token rotation lock-protected, 8-thread stress tested.
- Tokenizer input + output symlink TOCTOU defence on raw path.
- SSE generator switched to async (asyncio.sleep) for non-blocking
  multi-subscriber operation.
- CORS regex for --public LAN mode (the old fixed allowlist of
  http://0.0.0.0:port never matched a real Origin header).
- _has_mlx_weights per-entry lstat so a symlinked weights.npz can't
  trigger MLX dispatch.

Test count: 8257 -> 8285 (+57 in tests/test_v0539.py, minus the
relaxed v0.53.8 version-pin asserts in tests/test_v0538.py).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-14 04:28:19 +05:00
Alpamys ff55e751ab fix(v0.33.0): review-wave findings (CRITICAL + HIGH + MEDIUM + LOW)
Addresses findings from 5-agent review wave (python-reviewer,
code-reviewer, security-reviewer, tdd-guide, smoke-verification).

CRITICAL:
- cans/run.py _deploy_target ollama path: rglob *.gguf result is now
  realpath+commonpath checked against extract_dir before forwarding to
  `soup deploy ollama --gguf`. Prevents a crafted symlink in the can
  from making rglob point at an arbitrary on-disk path.

HIGH:
- cans/publish.py: removed dead update_repo_settings + bare-except tag
  block (was a no-op network round-trip). Tag attachment via README
  front-matter is documented as a v0.33.x docs follow-up.
- registry/attach.py lookup_entry_by_output_dir: emits ResourceWarning
  when the 1000-row scan limit is hit (was a silent miss).
- data/collators.py CrossDocCollator: stops mutating input dicts via
  pop() — uses get + dict comprehension. HF Dataset rows are cached and
  reused; mutation broke subsequent batches silently. Bare-except now
  logs at DEBUG level so production degradation is inspectable.
- monitoring/callback.py _write_spike_recovery_hint: added is_under_cwd
  guard. args.output_dir came from raw HF TrainingArguments without
  separate path-containment check.
- trainer/rewards.py MACOS_SANDBOX_PROFILE: narrowed (allow mach-lookup)
  to a 3-name allowlist (SecurityServer, notification_center,
  opendirectoryd.libinfo). Broad mach-lookup permitted DNS / NSURLSession
  via launchd, defeating (deny network*).
- cans/run.py: PermissionError → ValueError so a caller wrapping in
  `except OSError` cannot silently swallow the consent gate.
  PermissionError is an OSError subclass.
- commands/can.py run_cmd: assigns result=None up front + explicit None
  guard so a future _fail bypass cannot trigger NameError on result.
- utils/v028_features.py: added type annotations on apply_v028_speed_memory
  (model: Any, tcfg: TrainingConfig via TYPE_CHECKING, console: Console)
  and warn_unsupported_features.
- cans/run.py: confirm_callback now annotated
  Callable[[Manifest], bool] for IDE introspection.
- tests/test_part_b.py reexec test: drops env-var contamination
  (RANK/WORLD_SIZE/LOCAL_RANK/ACCELERATE_*) before run, patches
  imported names on train module, and forces assertion that
  os.execvp was called — no more silent skip-on-bypass.
- tests/test_part_d.py: added TestGenerateResponseSignature
  source-level guard that catches the lenient logits_processor mock
  silently passing.

MEDIUM:
- cans/run.py _run_subprocess: catches subprocess.TimeoutExpired and
  returns rc=124 (coreutils convention) so callers see a clean
  CanRunResult instead of an unhandled traceback after the 24h cap.
- cans/run.py: temp dir created via mkdtemp is now cleaned up on
  extract_can failure (try/except + cleanup_extract_dir).
- cans/run.py cleanup_extract_dir: switched startswith path check to
  os.path.commonpath (project-standard idiom; Windows-safe).
- cans/schema.py DeployTarget._safe_relpath: normalises mixed
  separators before splitting on '/' so foo/..\bar can no longer
  bypass the .. check.
- utils/lr_finder.py run_lr_sweep: removed redundant local
  `import math as _math` (math already at module level).

LOW:
- eval/gate.py _parse_judge_url: removed bare http:// catchall after
  scheme allowlist. Defence-in-depth for callers that bypass the
  Pydantic GateTask validator.
- utils/auto_quant.py evaluate_candidate: latency mean now divides by
  *completed* prompts (excludes crashed). Crashed candidate no longer
  appears artificially fast.
- utils/auto_quant.py Candidate.__post_init__: explicitly rejects bool
  in score / latency_ms (bool is a subclass of int, was sneaking past).
- utils/mii.py: removed `noqa: F401` on Optional import (now actually
  used in type annotation since we restored it).

Tests added (+7, total 3811→3818):
- test_part_a_wave1: attach_artifact outside-cwd rejection.
- test_part_a_wave2: PermissionError→ValueError migration in 2 tests.
- test_part_c: CrossDocCollator mismatched doc_lengths fallback,
  does-not-mutate-input-dict regression guard.
- test_part_d: source-level _generate_response signature guard.
- test_part_e: should_recover at max_attempts, outside-cwd skip.

Lint: clean. Full suite: 3818 passed in 156s.

Findings deliberately not actioned (with rationale):
- code-review M1 (mii Pydantic at import-time): forward-ref resolution
  requires module-level definitions for FastAPI; documented in mii.py.
- code-review M4 (supports_v028_features vs validator divergence):
  the v0.33.0 schema validator was renamed to
  _validate_v028_speed_memory_supported_tasks and now imports
  supports_v028_features — they cannot drift.
- python-review LOW (_deploy_target vllm silent no-op): documented in
  the docstring as advisory; logging requires a console arg the
  helper does not currently take.
- security-review LOW 8/9 (TOCTOU window, CLONE_NEWPID): theoretical;
  documented in CLAUDE.md security section in the next commit.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-27 19:57:57 +05:00
Alpamys e406688f2d feat(training): stability auto-tuning live (v0.33.0 Part E)
Closes #56, #57, #58, #59.

#56 Live --find-lr in-process LR-sweep:
- New utils/lr_finder.run_lr_sweep(model, dataloader, schedule,
  optimizer_factory, device): per-step LR mutation + forward + backward,
  records loss until exhaustion or NaN/Inf divergence.
- commands/train.py wires it via _live_lr_sweep_from_config (loads model
  + tokenizer + first N rows of cfg.data.train), with synthetic-curve
  fallback so users without GPU/torch still get a parseable report.

#57 Loss-spike recovery hint:
- SoupTrainerCallback gains spike_recovery / spike_recovery_max_attempts
  / spike_recovery_lr_decay; on watchdog fire writes
  output_dir/spike_recovery.json with previous_lr, recommended_lr (per
  SpikeRecoveryStrategy.compute_new_lr), should_recover, attempts. A
  wrapper / re-launch can resume with the decayed LR. Live optimizer
  rewind is intentionally NOT done — HF Trainer has no safe public API
  for mid-loop optimizer-state mutation; the JSON hint is the contract.

#58 auto_mixed_precision push to TrainingArguments:
- New SFTTrainerWrapper._resolve_mixed_precision: when
  tcfg.auto_mixed_precision is True, queries torch.cuda compute
  capability and calls pick_mixed_precision(base, cc) to set
  bf16=/fp16= flags. CPU short-circuits to (False, False). When the
  flag is False, legacy default preserved (bf16=cuda).

#59 Grad-accum advisory (Phase 1):
- SoupTrainerCallback gains grad_accum_auto_tune /
  grad_accum_pressure_threshold / grad_accum_total_vram_gb /
  grad_accum_current_steps / grad_accum_current_batch.
- on_log samples torch.cuda.max_memory_allocated each step; if
  GradAccumMonitor.should_adjust crosses the threshold once,
  prints (batch, accum) -> (new_batch, new_accum) advisory and
  short-circuits (one-shot). Phase 2 (live DataLoader rebuild)
  needs a small TRL upstream PR — tracked as a known limitation.

Wiring:
- soup_cli/trainer/sft.py: _resolve_mixed_precision helper, batch_size
  preserved on self, SoupTrainerCallback constructor passes through new
  spike + grad-accum knobs.
- soup_cli/monitoring/callback.py: rich Console import added (was
  previously module-relative); spike + grad-accum state fields and
  one-shot helpers.

Tests: +15 in tests/test_part_e.py covering the LR-sweep loop with
mocked model + optimizer (records, divergence break), mixed-precision
resolver across cpu/cuda + auto-flag combinations + qwen2 fp16 quirk on
Ampere, spike recovery hint write + attempts increment + disabled
no-op, grad-accum advisory one-shot semantics + threshold + cuda-absent
+ disabled.

Known limitations (release notes):
- #57 spike recovery is a JSON hint, not in-process optimizer rewind
- #59 Phase 2 (live DataLoader rebuild on advisory) deferred

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-27 18:33:39 +05:00
Alpamys ddab34115c feat(v0.26.0): Parts B-E — Eval Gate, Trace-to-Pref, Quant-Check, Soup Cans
Closes the v0.26.0 "Red and Blue Ocean" flywheel after Part A (Registry):
Train (eval-gated) -> Registry -> Deploy (quant-check) -> Trace-to-Pref -> Train.

Part B — Eval-Gated Training:
- soup_cli/config/schema.py: EvalGateConfig (enabled/suite/every_n_epochs/
  regression_threshold/baseline/on_regression) + TrainingConfig.eval_gate field
- soup_cli/eval/gate.py: EvalSuite, GateTask, run_gate, resolve_baseline,
  load_suite; baselines from registry:// or file
- soup_cli/monitoring/callback.py: on_epoch_end + _run_eval_gate with fail-safe
  error handling (structured errors treated as regressions under on_regression=stop)
- soup_cli/commands/train.py: --gate <suite.yaml> shortcut flag
- soup_cli/commands/eval.py: gate subcommand (stub generator; live scoring v0.26.1)

Part C — Trace-to-Preference:
- soup_cli/data/traces/: parse_langchain, parse_openai, parse_soup_serve;
  build_pairs from thumbs_up / regenerations / user_edit
- soup_cli/commands/data.py: from-traces + review subcommands
- PII warning panel, 100,000-line cap, path containment, Literal validation

Part D — Quant-Lobotomy Checker:
- soup_cli/eval/quant_check.py: classify_delta (OK/MINOR/MAJOR), run_quant_check,
  resolve_model_ref with artifact kinds filter, table/json/markdown renderers
- soup_cli/commands/eval.py: quant-check subcommand

Part E — Soup Cans:
- soup_cli/cans/: Manifest + DataRef (Pydantic v2); pack_entry + fork_can
  (100MB cap, dunder-key guard); safe tar extraction (filter='data' on py3.12+,
  narrow fallback, manual symlink rejection + commonpath check)
- soup_cli/commands/can.py: pack/inspect/verify/fork subcommands

Shared utility:
- soup_cli/utils/paths.py: single is_under_cwd helper replacing 5 duplicates
  (os.path.realpath + commonpath — Windows 8.3 short-name safe)

Tests: 103 new (29 eval_gate + 24 trace_to_pref + 23 quant_check + 27 cans)
Full suite: 2511 passed on Windows Python 3.10.

Security hardening (review-driven, all severities fixed):
- EvalGateConfig bounds; GateTask null-byte + judge URL scheme allowlist
- Narrow except in _safe_extract so TarError from filter='data' is not swallowed
- resolve_model_ref artifact kinds filter (avoid wrong artifact)
- Manifest.author cap + null/newline rejection; created_at ISO-8601 validation
- fork_can dunder-key + null-byte rejection (prototype pollution prevention)
- fork_can size cap (100MB matches pack_entry)
- inspect_can/read_config refuse paths outside cwd

Docs:
- README.md: v0.26.0 "New in" block (flywheel); 43 recipes; all new commands
  in All Commands list; version examples bumped to 0.26.0; Windows-safe arrows
- CLAUDE.md: architecture + test table + schema + CLI + security section
  extended with B/C/D/E; phase vs Part terminology clarified; release
  checklist step 18 adds Known Limitations section; step 20 adds comment
  template; step 21 adds completeness check via gh issue list --milestone
- SECURITY.md: per-Part security notes (B/C/D/E) under v0.26.0
- CONTRIBUTING.md: test count + directory tree updates

Local smoke: version, eval gate, eval quant-check (table + json),
data from-traces, data review, can pack/inspect/verify/fork — all happy-path
end-to-end. Fixed Unicode arrows (U+2192) in can.py + gate.py that crashed on
Windows CP1252 consoles.

Deferred to v0.26.1 (known limitations, filed as issues post-release):
- eval gate/quant-check live model scoring (stub generator currently)
- data from-traces quality.py judge validation; serve --trace-log collector
- can run + can publish + orchestrator
- eval --attach-to-registry flag; export auto-artifact registration

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-20 21:37:05 +05:00
Alpamys 1b6b428aaa feat: v0.24.0 — Dataset Hub, Freeze Training, Loss Watchdog, Dataset Registry
Part A: HuggingFace Dataset browser
- soup data search: search HF Hub for datasets (sort by downloads/likes)
- soup data preview: preview remote dataset metadata, splits, features
- soup data download: stream HF dataset to local JSONL (with format conversion)
- Security: trust_remote_code=False, path traversal protection, samples cap at 1M

Part B: Freeze training (like LLaMA-Factory finetuning_type: freeze)
- freeze_layers / freeze_ratio config fields
- soup_cli/utils/freeze.py: detect layers, freeze bottom N
- Wired into SFT trainer before LoRA application
- Supports LLaMA (layers.N) and GPT-2 (h.N) naming

Part C: Loss watchdog (like Axolotl loss_watchdog_threshold)
- loss_watchdog, loss_watchdog_threshold, loss_watchdog_patience config
- Implemented in SoupTrainerCallback with patience counter
- Rich warning panel (stops Live display first), fires only once
- Wired into all 11 trainers via callback kwargs

Part D: Dataset info registry
- soup data register/unregister/registry commands
- ~/.soup/datasets.json local name→path+format mapping
- Name validation, path traversal protection, Rich markup escaping

82 new tests (2061 total), 74 test files.
2026-04-03 16:35:23 +05:00
Alpamys c46265fd18 feat: add eval platform with custom evals, LLM judge, human eval, leaderboard (v0.19.0)
Full-featured evaluation system with 7 subcommands:
- soup eval benchmark: standard benchmarks via lm-evaluation-harness
- soup eval custom: custom JSONL eval tasks with 4 scoring modes
- soup eval judge: LLM-as-a-judge (OpenAI/Ollama/server backends)
- soup eval auto: automatic post-training evaluation from config
- soup eval compare: side-by-side eval comparison with regression detection
- soup eval leaderboard: local model leaderboard with JSON/CSV export
- soup eval human: terminal A/B comparison with Elo ratings

New modules: soup_cli/eval/ (custom.py, judge.py, human.py, leaderboard.py)
Config: EvalConfig added to schema.py (auto_eval, benchmarks, custom_tasks, judge)
Callback: SoupTrainerCallback.on_train_end triggers auto-eval when configured

Security: SSRF protection on judge API, ReDoS guard on regex scoring,
API key isolation per provider, 10k task/prompt caps, read-only SQL queries

1585 tests, 58 test files, ruff clean
2026-04-01 14:47:08 +05:00
Alpamys 4010798e2b Fix PyTorch 2.7 compatibility: total_mem → total_memory (v0.2.1)
PyTorch 2.7+ renamed `get_device_properties().total_mem` to
`total_memory`. Fixed in gpu.py and callback.py.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-04 00:37:07 +05:00
Alpamys 2aaa87fb4e Phase 2: experiment tracking, data tools, model evaluation
- Add SQLite experiment tracker (~/.soup/experiments.db) with auto-logging
  of config, per-step metrics, hardware info, and eval results
- Add soup runs commands: list, show (with plotext loss curves), compare, delete
- Integrate tracker into soup train (auto start_run/finish_run/fail_run)
- Add soup data convert (alpaca/sharegpt/chatml bidirectional conversion)
- Add soup data merge (concatenate datasets with optional shuffle)
- Add soup data dedup (MinHash near-duplicate removal via datasketch)
- Add soup data stats (length percentiles, token counts, language detection)
- Add soup eval (lm-evaluation-harness wrapper with tracker integration)
- Add reverse format conversion: messages_to_format() in data/formats.py
- Add extended_stats() to data/validator.py
- Update monitoring callback to log metrics to tracker
- Add plotext to deps, datasketch as optional [data] dep
- Update README and CLAUDE.md with Phase 2 docs
- 70 tests passing, ruff clean

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-23 23:34:28 +05:00
Alpamys 7433029d19 Fix all ruff lint errors and failing test
- Fix 23 ruff errors: line too long, unused imports, ambiguous vars
- Fix validator: empty string is valid data, only count None as empty
- Remove unused imports in display.py and validator.py
- Rename ambiguous `l` vars to `part`, `entry`, `length`
- Break long lines in callback.py, display.py, sft.py, constants.py

All 20 tests passing, ruff clean.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-20 16:25:46 +05:00
Alpamys d6e932a1d3 Initial project setup: CLI skeleton + config + trainer + data pipeline
- Typer CLI: soup init, soup train, soup data inspect/validate
- Pydantic config schema with YAML loader and validation
- Data pipeline: JSONL/JSON/CSV/Parquet + HuggingFace datasets
- Format detection: Alpaca, ShareGPT, ChatML (auto-detect)
- SFT trainer wrapper over transformers + peft + trl
- QLoRA/LoRA support with auto batch size estimation
- GPU detection (CUDA/MPS/CPU) and memory calculation
- Rich live terminal dashboard for training monitoring
- Config templates: chat, code, medical
- Tests (pytest) + GitHub Actions CI
- MIT license

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-20 16:14:56 +05:00